Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886924.1_cds_XP_016441095.1_36489
CDS Infomation

[gene=LOC107766765] [db_xref=GeneID:107766765] [protein=cleavage and polyadenylation specificity factor subunit 2-like] [protein_id=XP_016441095.1] [location=join(333..481,652..820,1576..1672,1908..2034,2123..2238,2722..2816,2900..3051,4009..4063,4140..4247,4680..4932,6484..6668,7588..7680,9831..9929,11766..11897,11987..12031,12453..12620,12715..12789,12906..13007)] [gbkey=CDS]
Sequence

ATGGGAACGTCGGTTCAGGTGACGCCACTGTGTGGAGTGTACAATGAGAACCCTCTCTCT
TACCTCGTATCTATCGATGGCTTCAATTTCCTCATCGATTGTGGTTGGAATGACCAATTT
GACACTTCTCTTCTTCAGCCCCTTTCCAGGGTAGCTTCAAGTGTGGATGCTGTATTGCTA
TCACACTCTGATACATTTCATCTCGGTGCATTGCCCTATGCTATGAAACAACTTGGTCTT
TCCGCTCCTATTTATGCTACAGAACCAGTGTACAGACTAGGGTTACTAACTATGTATGAT
CACTATCTCTCACGGAAGCAAGTTTCAGAGTTTGATCTATTCACTTTGGATGACATTGAT
TCTGCGTTCCAAAATGTGACCAGATTAACCTACTCTCAAAATCATTACATGTCTGGAAAA
GGAGAAGGGATTGTTATTGCTCCACTGGTAGCTGGTCATCTGTTAGGAGGTACTACATGG
AAGATAACAAAAGATGGGGAGGATGTCATATACGCTGTTGACTTCAATCACCGTAAAGAA
AGACATCTGAATGGAACTGTTTTAGAGTCTTTTGTCCGTCCAGCTGTTCTAATAACGGAT
GCCTTTAATGCCTTAAACAATCAACCCTCTAGGCGCCAAAGGGACCAAGAGTTTCTAGAT
GCCATAGAGAAAACGGTAAATGTTGGGGGAAATGTATTACTTCCTGTTGATACTGCTGGT
AGAGTTTTGGAGCTCATCTTGACGTTGGAACAGCACTGGACACAAAAGCAGTTGTCGACT
CCCATCTTCTTCCTCTCATATGTAGCATCAAGTACTGTTGACTATGCGAAGAGTTTCCTT
GAGTGGATGAGCGATTCAATTGCAAAATCTTTTGAGCACACTCGGGACAATGCTTTTCTA
TTAAGGAAAATTAAGCTCGTGATTAACAAGAGTGGTCTTGAAGAAGTTCCTGGGCCAAAG
GTTGTTATGGCTTCCATGGCCAGTTTAGAAGCTGGATATGCACATGACATCTTTGTTGAA
TGGGCAGCTGATCCAAAGAATCTTGTTCTGTTCACTGAAAGAGGGCAGTTTGGCACATTG
GCACGCATTCTTCAGTCAAATCCACCTCCTAAAGCTGTTAAAGTTACTATGTCAAGGAGA
ATTCCCTTGGTTGGTGAGGAGTTAGCCGCTTATGAGGAGGAGCAAAACAGGATAAAAAGG
GAAGAAGCTCTCAGAGCTACTCTTGTTAAAGAGGAGGAATCAAAAGCGCTTATTGGGGCC
GAAGTCATCACCGGTGACCCAATGGTCATTGATGCCAATGTCACACATGCTTCCTCCAAT
GCTGCTGGTCCGTACAGTGGTGCTTTCAAGGATGTCTTGATTGATGGATTTGTTCCACCT
TCATCTAGCGTAGCTCCAATGTTCCCTTTCTATGATAACACCTCTGAGTGGGATGACTTT
GGTGAAGTCATCAATCCAGATGATTACGTGATCAAAGATGACAATATGGAGCAGTTGTCA
ATGCATGTTGATGGAGATCTAAATGGAAACCTTGATGAAGGATCAGCAAATCTAATCCTT
GATACAACGCCCTCAAAAGTTGTATCTTCAGAGTTAACAGTACAAGTCAAGTGTTCCTTA
TTATACGTGGATTTTGAAGGTCGTTCAGATGGCCGTTCGATCAAATCAATTCTTGCTCAT
GTTGCGCCCTTAAAGCTTGTATTGGTGCATGGATCAGCTGAAGCCACTGAGCATCTGAAG
CAACATTGTCTGAAACAAGTTTGTCCGCATGTTTACGCTCCCCAGTTAGAAGAAACAATT
GACGTCACTTCAGATTTGTGTGCTTATAAGGTCCAACTCTCTGAGAAGCTAATGAGCAAA
GTGCTCTTTAAGAAGCTTGGAGACTATGAAATAGCATGGGTTGATGCTGAAGTGGGGAGG
ACAGAAAATGACATGATCTCTTTACTTCCTCTCTCGGGACCCGCTCCCCCGCATAAAACA
GTTCTCGTCGGAGATATAAAAATGTCCGATTTCAAGCAGTTTCTCGCCAGCAAGGGCGTC
CAGGTAGAATTTGCTGGTGGTGCTTTACGTTGCGGGGAGTATGTGACCATTCGCAAAGTT
GGAGATGCTAGTCAAAAGGTTGGAGGTGCTGCTATTCAGCAGATCGTGCTTGAAGGTCCA
TTGTCTGAAGAGTACTATAAAATTCGAGAATACCTATATTCACATTTTTATTCCCTCTAA

Peptide Sequence

PEP ID

XP_016441095.1
PEP Infomation

PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like [Nicotiana tabacum]
Sequence

MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDQFDTSLLQPLSRVASSVDAVLL
SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID
SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWKITKDGEDVIYAVDFNHRKE
RHLNGTVLESFVRPAVLITDAFNALNNQPSRRQRDQEFLDAIEKTVNVGGNVLLPVDTAG
RVLELILTLEQHWTQKQLSTPIFFLSYVASSTVDYAKSFLEWMSDSIAKSFEHTRDNAFL
LRKIKLVINKSGLEEVPGPKVVMASMASLEAGYAHDIFVEWAADPKNLVLFTERGQFGTL
ARILQSNPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALRATLVKEEESKALIGA
EVITGDPMVIDANVTHASSNAAGPYSGAFKDVLIDGFVPPSSSVAPMFPFYDNTSEWDDF
GEVINPDDYVIKDDNMEQLSMHVDGDLNGNLDEGSANLILDTTPSKVVSSELTVQVKCSL
LYVDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKQVCPHVYAPQLEETI
DVTSDLCAYKVQLSEKLMSKVLFKKLGDYEIAWVDAEVGRTENDMISLLPLSGPAPPHKT
VLVGDIKMSDFKQFLASKGVQVEFAGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEGP
LSEEYYKIREYLYSHFYSL

Transcript Sequence

Gene sequence data has not been registered.